4UD9: Thrombin in complex with 5-chlorothiophene-2-carboxamide

PDB ID: 4UD9Download
MMDB ID: 132013
PDB Deposition Date: 2014/12/9
Updated in MMDB: 2022/12
Experimental Method:
x-ray diffraction
Resolution: 1.124  Å
Source Organism:
Homo sapiens▼
Similar Structures:
Biological Unit for 4UD9: trimeric; determined by author and by software (PISA)
Molecular Components in 4UD9
Label Count Molecule
Proteins (3 molecules)
1
Thrombin Heavy Chain
Molecule annotation
1
Hirudin-2
Molecule annotation
1
Prothrombin
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
2
SODIUM IONSODIUM ION
2
1
PHOSPHATE IONPHOSPHATE ION
3
2
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
4
3
GLYCEROLGLYCEROL
5
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
6
1
5-CHLORO-2-THIOPHENECARBOXAMIDE5-CHLORO-2-THIOPHENECARBOXAMIDE
7
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
8
1
Molecule information is not available.
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303