4U60: Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1 in complex with GM1 oligosaccharide

PDB ID: 4U60Download
MMDB ID: 131409
PDB Deposition Date: 2014/7/26
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.5  Å
Source Organism:
Similar Structures:
Biological Unit for 4U60: pentameric; determined by author and by software (PISA)
Molecular Components in 4U60
Label Count Molecule
Proteins (5 molecules)
5
Structural Protein VP1
(Gene symbol: VP1)
Molecule annotation
Chemicals and Non-standard biopolymers (31 molecules)
1
6
beta-D-galactopyranosebeta-D-galactopyranose
2
5
N-acetyl-alpha-neuraminic acidN-acetyl-alpha-neuraminic acid
3
4
2-acetamido-2-deoxy-beta-D-galactopyranose2-acetamido-2-deoxy-beta-D-galactopyranose
4
2
beta-D-glucopyranosebeta-D-glucopyranose
5
9
GLYCEROLGLYCEROL
6
5
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303