4TQS: Ternary complex of Y-family DNA polymerase Dpo4 with (5'S)-8,5'-Cyclo-2'-deoxyguanosine and dCTP

PDB ID: 4TQSDownload
MMDB ID: 126084
PDB Deposition Date: 2014/6/11
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.06  Å
Source Organism:
Saccharolobus solfataricus P2▼
Similar Structures:
Biological Unit for 4TQS: hexameric; determined by author and by software (PISA)
Molecular Components in 4TQS
Label Count Molecule
Proteins (2 molecules)
2
DNA Polymerase IV
Molecule annotation
Nucleotides(4 molecules)
2
DNA (5'-d(*gp*gp*gp*gp*gp*ap*ap*gp*gp*ap*tp*t)-3')
Molecule annotation
2
DNA (5'-d(p*tp*cp*ap*cp*(2lf)p*gp*ap*ap*tp*cp*cp*tp*tp*cp*cp*cp*cp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
2
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
2
4
MAGNESIUM IONMAGNESIUM ION
3
2
2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303