4RW3: Structural insights into substrate binding of brown spider venom class II phospholipases D

PDB ID: 4RW3Download
MMDB ID: 129706
PDB Deposition Date: 2014/12/1
Updated in MMDB: 2015/12
Experimental Method:
x-ray diffraction
Resolution: 1.72  Å
Source Organism:
Similar Structures:
Biological Unit for 4RW3: monomeric; determined by author and by software (PISA)
Molecular Components in 4RW3
Label Count Molecule
Protein (1 molecule)
1
Phospholipase D Lisictox-alphaia1bii
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
1
MAGNESIUM IONMAGNESIUM ION
2
2
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
3
1
D-MYO-INOSITOL-1-PHOSPHATED-MYO-INOSITOL-1-PHOSPHATE
4
1
GLYCEROLGLYCEROL
5
1
OCTANOIC ACID (CAPRYLIC ACID)OCTANOIC ACID (CAPRYLIC ACID)
6
1
HEPTANOIC ACIDHEPTANOIC ACID
7
2
DECANOIC ACIDDECANOIC ACID
8
3
PALMITIC ACIDPALMITIC ACID
9
1
N-TRIDECANOIC ACIDN-TRIDECANOIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303