4RKU: Crystal Structure Of Plant Photosystem I At 3 Angstrom Resolution

PDB ID: 4RKUDownload
MMDB ID: 126711
PDB Deposition Date: 2014/10/14
Updated in MMDB: 2015/02
Experimental Method:
x-ray diffraction
Resolution: 3  Å
Source Organism:
Similar Structures:
Biological Unit for 4RKU: heptadecameric; determined by author
Molecular Components in 4RKU
Label Count Molecule
Proteins (17 molecules)
1
Photosystem I P700 Chlorophyll a Apoprotein A1
(Gene symbol: psaA)
Molecule annotation
1
Photosystem I P700 Chlorophyll a Apoprotein A2
(Gene symbol: psaB)
Molecule annotation
1
Photosystem I Iron-sulfur Center
(Gene symbol: psaC)
Molecule annotation
1
Photosystem I Reaction Center Subunit II, Chloroplastic
Molecule annotation
1
Photosystem I Reaction Center Subunit IV B, Chloroplastic
Molecule annotation
1
Photosystem I Reaction Center Subunit Iii, Chloroplastic
Molecule annotation
1
Photosystem I Reaction Center Subunit V, Chloroplastic
Molecule annotation
1
Photosystem I Reaction Center Subunit VI, Chloroplastic
Molecule annotation
1
Photosystem I Reaction Center Subunit Viii
(Gene symbol: psaI)
Molecule annotation
1
Photosystem I Reaction Center Subunit IX
Molecule annotation
1
Photosystem I Reaction Center Subunit X Psak
Molecule annotation
1
Photosystem I Reaction Center Subunit XI, Chloroplastic
Molecule annotation
1
Photosystem I-N Subunit
Molecule annotation
1
Chlorophyll A-B Binding Protein 6A, Chloroplastic
Molecule annotation
1
Type II Chlorophyll A/B Binding Protein From Photosystem I
Molecule annotation
1
Chlorophyll A-B Binding Protein 3, Chloroplastic
Molecule annotation
1
Chlorophyll A-B Binding Protein P4, Chloroplastic
Molecule annotation
Chemicals and Non-standard biopolymers (200 molecules)
1
2
PhylloquinonePhylloquinone
2
21
Beta-CaroteneBeta-Carotene
3
5
1,2-Dipalmitoyl-Phosphatidyl-Glycerole1,2-Dipalmitoyl-Phosphatidyl-Glycerole
4
157
Chlorophyll AChlorophyll A
5
3
IronSULFUR CLUSTERIronSULFUR CLUSTER
6
1
Chlorophyll A IsomerChlorophyll A Isomer
7
1
Digalactosyl Diacyl Glycerol (Dgdg)Digalactosyl Diacyl Glycerol (Dgdg)
8
2
1,2-Distearoyl-Monogalactosyl-Diglyceride1,2-Distearoyl-Monogalactosyl-Diglyceride
9
6
(3r,3'r,6s)-4,5-Didehydro-5,6-Dihydro-Beta,Beta-Carotene-3,3'-Diol(3r,3'r,6s)-4,5-Didehydro-5,6-Dihydro-Beta,Beta-Carotene-3,3'-Diol
10
1
(1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r,6r)-4-Hydroxy-2,2,6-Trimethyl-7-Oxabicyclo[4.1.0]hept-1-Yl]-3,7,12,16-Tetramethyloctadeca-1,3,5,7,9,11,13,15,17-Nonaenylidene}-1,5,5-Trimethylcyclohexane-1,3-Diol(1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r,6r)-4-Hydroxy-2,2,6-Trimethyl-7-Oxabicyclo[4.1.0]hept-1-Yl]-3,7,12,16-Tetramethyloctadeca-1,3,5,7,9,11,13,15,17-Nonaenylidene}-1,5,5-Trimethylcyclohexane-1,3-Diol
11
1
Sn-Glycerol-3-PhosphateSn-Glycerol-3-Phosphate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303