4QWC: Ternary Crystal Structures Of A Y-family Dna Polymerase Dpo4 From Sulfolobus Solfataricus In Complex With Dna And L-dcdp

PDB ID: 4QWCDownload
MMDB ID: 122758
PDB Deposition Date: 2014/7/16
Updated in MMDB: 2014/09
Experimental Method:
x-ray diffraction
Resolution: 2.4  Å
Source Organism:
Saccharolobus solfataricus P2▼
Similar Structures:
Biological Unit for 4QWC: trimeric; determined by author and by software (PISA)
Molecular Components in 4QWC
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase IV
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*gp*gp*cp*tp*ap*cp*ap*gp*gp*ap*cp*tp*c)-3')
Molecule annotation
1
DNA (5'- D(*tp*tp*cp*ap*gp*gp*ap*gp*tp*cp*cp*tp*gp*tp*ap*gp*cp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
Calcium IonCalcium Ion
2
2
Acetate IonAcetate Ion
3
1
4-Amino-1-{2-Deoxy-5-O-[(R)-Hydroxy(Phosphonooxy)phosphoryl]-Beta-L-Erythro-Pentofuranosyl}pyrimidin-2(1h)-One4-Amino-1-{2-Deoxy-5-O-[(R)-Hydroxy(Phosphonooxy)phosphoryl]-Beta-L-Erythro-Pentofuranosyl}pyrimidin-2(1h)-One
4
1
2',3'-Dideoxycytidine-5'-Monophosphate2',3'-Dideoxycytidine-5'-Monophosphate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303