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4QCL:
Crystal structure of the catalytic core of human DNA polymerase alpha in ternary complex with an RNA-primed DNA template and dCTP
PDB ID:
4QCL
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MMDB ID:
125062
PDB Deposition Date:
2014/5/12
Updated in MMDB:
2014/11
Experimental Method:
x-ray diffraction
Resolution:
2.2 Å
Source Organism:
synthetic construct
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Taxonomy
Molecule
synthetic construct
C
Homo sapiens
A
Similar Structures:
VAST+
Download sequence data
Biological Unit for 4QCL: trimeric; determined by author and by software (PISA)
Molecular Components in 4QCL
Label
Count
Molecule
Protein (1 molecule)
A
1
DNA Polymerase Alpha Catalytic Subunit
Nucleotide(1 molecule)
C
1
DNA Template
Chemicals and Non-standard biopolymers (9 molecules)
B
1
RNA PRIMER
1
1
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
2
1
MAGNESIUM ION
3
3
ZINC ION
4
1
POTASSIUM ION
5
1
PENTAETHYLENE GLYCOL
6
1
1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303