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4OQ9:
Satellite Tobacco Mosaic Virus Refined To 1.4 A Resolution Using Non- Crystallographic Symmetry Restraints
PDB ID:
4OQ9
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MMDB ID:
123027
PDB Deposition Date:
2014/2/7
Updated in MMDB:
2014/09
Experimental Method:
x-ray diffraction
Resolution:
1.45 Å
Source Organism:
Satellite tobacco mosaic virus
Similar Structures:
VAST+
Download sequence data
Biological Unit for 4OQ9: 240-meric
Molecular Components in 4OQ9
Label
Count
Molecule
Proteins (60 molecules)
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
A_1
A_2
A_3
B_1
B_2
B_3
C_1
C_2
C_3
D_1
D_2
D_3
E_1
E_2
E_3
…
60
Coat Protein
Nucleotides(180 molecules)
P
Q
R
S
T
U
V
W
X
Y
Z
a
b
c
d
P_1
P_2
P_3
Q_1
Q_2
Q_3
R_1
R_2
R_3
S_1
S_2
S_3
T_1
T_2
T_3
…
60
RNA (5'-r(p*ap*ap*ap*ap*ap*ap*ap*ap*ap*a)-3')
e
f
g
h
i
j
k
l
m
n
o
p
q
r
s
e_1
e_2
e_3
f_1
f_2
f_3
g_1
g_2
g_3
h_1
h_2
h_3
i_1
i_2
i_3
…
60
RNA (5'-r(p*up*up*up*up*up*up*up*up*up*u)-3')
t
u
v
w
x
y
z
1
2
3
4
5
6
7
8
t_1
t_2
t_3
u_1
u_2
u_3
v_1
v_2
v_3
w_1
w_2
w_3
x_1
x_2
x_3
…
60
RNA (5'-r(p*up*u)-3')
Chemicals and Non-standard biopolymers (163 molecules)
1
12
Phosphate Ion
2
72
Sulfate Ion
3
67
Sodium Ion
4
12
Magnesium Ion
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303