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4OGL:
X-ray structure uridine phosphorylase from Vibrio cholerae in complex with thymine at 1.25 A resolution
PDB ID:
4OGL
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MMDB ID:
127425
PDB Deposition Date:
2014/1/16
Updated in MMDB:
2018/03
Experimental Method:
x-ray diffraction
Resolution:
1.249 Å
Source Organism:
Vibrio cholerae O1 biovar El Tor str. N16961
Similar Structures:
VAST+
Download sequence data
Biological Unit for 4OGL: hexameric; determined by author and by software (PISA)
Molecular Components in 4OGL
Label
Count
Molecule
Proteins (6 molecules)
A
B
C
D
E
F
6
Uridine Phosphorylase
Chemicals and Non-standard biopolymers (25 molecules)
1
6
THYMINE
2
9
1,2-ETHANEDIOL
3
6
GLYCEROL
4
3
SODIUM ION
5
1
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303