NCBI
National Center for
Biotechnology Information
Search
4OGK:
X-ray structure of the uridine phosphorylase from Salmonella typhimurium in complex with thymidine at 2.40 A resolution
PDB ID:
4OGK
Download
MMDB ID:
127424
PDB Deposition Date:
2014/1/16
Updated in MMDB:
2023/09
Experimental Method:
x-ray diffraction
Resolution:
2.4 Å
Source Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Similar Structures:
VAST+
Download sequence data
Biological Unit for 4OGK: hexameric; determined by author and by software (PISA)
Molecular Components in 4OGK
Label
Count
Molecule
Proteins (6 molecules)
A
B
C
D
E
F
6
Uridine Phosphorylase
(Gene symbol:
udp
)
Chemicals and Non-standard biopolymers (13 molecules)
1
5
THYMIDINE
2
1
ISOPROPYL ALCOHOL
3
4
1,2-ETHANEDIOL
4
1
DI(HYDROXYETHYL)ETHER
5
1
TETRAETHYLENE GLYCOL
6
1
POTASSIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303