NCBI
National Center for
Biotechnology Information
Search
4O0I:
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with 2'-MeSe-arabino-guanosine derivatized DNA
PDB ID:
4O0I
Download
MMDB ID:
125587
PDB Deposition Date:
2013/12/13
Updated in MMDB:
2017/12
Experimental Method:
x-ray diffraction
Resolution:
2.203 Å
Source Organism:
synthetic construct
▼
Taxonomy
Molecule
synthetic construct
B, C
Geobacillus stearothermophilus
A
Similar Structures:
VAST+
Download sequence data
Biological Unit for 4O0I: trimeric; determined by author and by software (PISA)
Molecular Components in 4O0I
Label
Count
Molecule
Protein (1 molecule)
A
1
DNA Polymerase I
Nucleotides(2 molecules)
B
C
2
5'-d(*c*(1tw)p*cp*gp*ap*ap*tp*tp*cp*gp*cp*g)-3'
Chemicals and Non-standard biopolymers (9 molecules)
1
6
SULFATE ION
2
1
GLYCEROL
3
2
SODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303