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4NHY:
Crystal structure of human OGFOD1, 2-oxoglutarate and iron-dependent oxygenase domain containing 1, in complex with pyridine-2,4-dicarboxylic acid (2,4-PDCA)
PDB ID:
4NHY
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MMDB ID:
124830
PDB Deposition Date:
2013/11/5
Updated in MMDB:
2014/11
Experimental Method:
x-ray diffraction
Resolution:
2.603 Å
Source Organism:
Homo sapiens
Similar Structures:
VAST+
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Biological Unit for 4NHY: monomeric; determined by author
Molecular Components in 4NHY
Label
Count
Molecule
Protein (1 molecule)
A
1
2-oxoglutarate and Iron-dependent Oxygenase Domain-containing Protein 1
(Gene symbol:
OGFOD1
)
Chemicals and Non-standard biopolymers (3 molecules)
1
1
MANGANESE (II) ION
2
1
GLYCEROL
3
1
PYRIDINE-2,4-DICARBOXYLIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303