4LIN: Exploring The Atomic Structure And Conformational Flexibility Of A 320 Angstrom Long Engineered Viral Fiber Using X-ray Crystallography

Citation:
Abstract
Protein fibers are widespread in nature, but only a limited number of high-resolution structures have been determined experimentally. Unlike globular proteins, fibers are usually recalcitrant to form three-dimensional crystals, preventing single-crystal X-ray diffraction analysis. In the absence of three-dimensional crystals, X-ray fiber diffraction is a powerful tool to determine the internal symmetry of a fiber, but it rarely yields atomic resolution structural information on complex protein fibers. An 85-residue-long minimal coiled-coil repeat unit (MiCRU) was previously identified in the trimeric helical core of tail needle gp26, a fibrous protein emanating from the tail apparatus of the bacteriophage P22 virion. Here, evidence is provided that an MiCRU can be inserted in frame inside the gp26 helical core to generate a rationally extended fiber (gp26-2M) which, like gp26, retains a trimeric quaternary structure in solution. The 2.7 A resolution crystal structure of this engineered fiber, which measures approximately 320 A in length and is only 20-35 A wide, was determined. This structure, the longest for a trimeric protein fiber to be determined to such a high resolution, reveals the architecture of 22 consecutive trimerization heptads and provides a framework to decipher the structural determinants for protein fiber assembly, stability and flexibility.
PDB ID: 4LINDownload
MMDB ID: 117470
PDB Deposition Date: 2013/7/2
Updated in MMDB: 2014/03
Experimental Method:
x-ray diffraction
Resolution: 2.7  Å
Source Organism:
Similar Structures:
Biological Unit for 4LIN: trimeric; determined by author and by software (PISA)
Molecular Components in 4LIN
Label Count Molecule
Proteins (3 molecules)
3
Tail Needle Protein Gp26
Molecule annotation
Chemicals (3 molecules)
1
1
2
2
* Click molecule labels to explore molecular sequence information.

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