4FCH: Crystal Structure Suse From Bacteroides Thetaiotaomicron With Maltoheptaose

Citation:
Abstract
Human colonic bacteria are necessary for the digestion of many dietary polysaccharides. The intestinal symbiont Bacteroides thetaiotaomicron uses five outer membrane proteins to bind and degrade starch. Here, we report the x-ray crystallographic structures of SusE and SusF, two outer membrane proteins composed of tandem starch specific carbohydrate-binding modules (CBMs) with no enzymatic activity. Examination of the two CBMs in SusE and three CBMs in SusF reveals subtle differences in the way each binds starch and is reflected in their K(d) values for both high molecular weight starch and small maltooligosaccharides. Thus, each site seems to have a unique starch preference that may enable these proteins to interact with different regions of starch or its breakdown products. Proteins similar to SusE and SusF are encoded in many other polysaccharide utilization loci that are possessed by human gut bacteria in the phylum Bacteroidetes. Thus, these proteins are likely to play an important role in carbohydrate metabolism in these abundant symbiotic species. Understanding structural changes that diversify and adapt related proteins in the human gut microbial community will be critical to understanding the detailed mechanistic roles that they perform in the complex digestive ecosystem.
PDB ID: 4FCHDownload
MMDB ID: 102473
PDB Deposition Date: 2012/5/24
Updated in MMDB: 2012/10
Experimental Method:
x-ray diffraction
Resolution: 1.3  Å
Source Organism:
Similar Structures:
Biological Unit for 4FCH: monomeric; determined by author and by software (PISA)
Molecular Components in 4FCH
Label Count Molecule
Protein (1 molecule)
1
Outer Membrane Protein Suse(Gene symbol: susE)
Molecule annotation
Chemicals (12 molecules)
1
4
2
2
3
6
* Click molecule labels to explore molecular sequence information.

Citing MMDB
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