4F8U: Crystal structure of the bacterial ribosomal decoding site in complex with sisomicin (C2 form)

PDB ID: 4F8UDownload
MMDB ID: 102004
PDB Deposition Date: 2012/5/18
Updated in MMDB: 2012/09
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Biological Unit for 4F8U: dimeric; determined by author and by software (PISA)
Molecular Components in 4F8U
Label Count Molecule
Nucleotides(2 molecules)
1
RNA (5'-r(p*up*gp*cp*gp*up*cp*ap*cp*ap*cp*cp*gp*gp*up*gp*ap*ap*gp*up*cp*gp*c)-3')
Molecule annotation
1
RNA (5'-r(p*gp*cp*gp*up*cp*ap*cp*ap*cp*cp*gp*gp*up*gp*ap*ap*gp*up*cp*gp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
(1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside(1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303