4EI5: Crystal Structure of XV19 TCR in complex with CD1d-sulfatide C24:1

PDB ID: 4EI5Download
MMDB ID: 101486
PDB Deposition Date: 2012/4/4
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 3.1  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 4EI5: tetrameric; determined by author
Molecular Components in 4EI5
Label Count Molecule
Proteins (4 molecules)
1
Antigen-presenting Glycoprotein Cd1d1
Molecule annotation
1
Beta-2-microglobulin
Molecule annotation
1
Valpha1 Xv19 Type II Natural Killer T Cell Receptor (Mouse Variable Domain, Human Constant Domain)
Molecule annotation
1
Vbeta16 Xv19 Type II Natural Killer T Cell Receptor (Mouse Variable Domain, Human Constant Domain)
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
7
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
1
CITRATE ANIONCITRATE ANION
4
1
(15Z)-N-((1S,2R,3E)-2-HYDROXY-1-{[(3-O-SULFO-BETA-D-GALACTOPYRANOSYL)OXY]METHYL}HEPTADEC-3-ENYL)TETRACOS-15-ENAMIDE(15Z)-N-((1S,2R,3E)-2-HYDROXY-1-{[(3-O-SULFO-BETA-D-GALACTOPYRANOSYL)OXY]METHYL}HEPTADEC-3-ENYL)TETRACOS-15-ENAMIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303