4EEY: Crystal Structure Of Human Dna Polymerase Eta In Ternary Complex With A Cisplatin Dna Adduct

Citation:
Abstract
A major clinical problem in the use of cisplatin to treat cancers is tumor resistance. DNA polymerase eta (Pol-eta) is a crucial polymerase that allows cancer cells to cope with the cisplatin-DNA adducts that are formed during chemotherapy. We present here a structure of human Pol-eta inserting deoxycytidine triphosphate (dCTP) opposite a cisplatin intrastrand cross-link (PtGpG). We show that the specificity of human Pol-eta for PtGpG derives from an active site that is open to permit Watson-Crick geometry of the nascent PtGpG-dCTP base pair and to accommodate the lesion without steric hindrance. This specificity is augmented by the residues Gln38 and Ser62, which interact with PtGpG, and Arg61, which interacts with the incoming dCTP. Collectively, the structure provides a basis for understanding how Pol-eta in human cells can tolerate the DNA damage caused by cisplatin chemotherapy and offers a framework for the design of inhibitors in cancer therapy.
PDB ID: 4EEYDownload
MMDB ID: 99433
PDB Deposition Date: 2012/3/28
Updated in MMDB: 2013/06
Experimental Method:
x-ray diffraction
Resolution: 2.32  Å
Source Organism:
synthetic construct
Similar Structures:
Biological Unit for 4EEY: trimeric; determined by author and by software (PISA)
Molecular Components in 4EEY
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase ETA(Gene symbol: POLH)
Molecule annotation
Nucleotides(2 molecules)
1
5'-d(*cp*tp*tp*gp*gp*tp*cp*tp*cp*cp*tp*cp*c)-3'
Molecule annotation
1
5'-d(*tp*gp*gp*ap*gp*gp*ap*gp*a)-3'
Molecule annotation
Chemicals (3 molecules)
1
1
2
1
3
1
* Click molecule labels to explore molecular sequence information.

Citing MMDB
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