4E7L: PFV integrase Strand Transfer Complex (STC-Mn*) following reaction in crystallo, at 3.0 A resolution

PDB ID: 4E7LDownload
MMDB ID: 99931
PDB Deposition Date: 2012/3/17
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 3.0001  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 4E7L: dodecameric; determined by author and by software (PISA)
Molecular Components in 4E7L
Label Count Molecule
Proteins (4 molecules)
4
Pro-pol Polyprotein
Molecule annotation
Nucleotides(8 molecules)
2
DNA (5'-d(*ap*tp*tp*gp*tp*cp*ap*tp*gp*gp*ap*ap*tp*tp*tp*cp*gp*cp*a)-3')
Molecule annotation
2
DNA (5'-d(*tp*gp*cp*gp*ap*ap*ap*tp*tp*cp*cp*ap*tp*gp*ap*cp*a)-3')
Molecule annotation
2
DNA (5'-d(*cp*cp*cp*gp*ap*gp*gp*cp*ap*cp*gp*tp*g)-3')
Molecule annotation
2
DNA (5'-d(p*cp*tp*ap*gp*cp*ap*cp*gp*tp*gp*cp*cp*tp*cp*gp*gp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
2
ZINC IONZINC ION
2
6
MANGANESE (II) IONMANGANESE (II) ION
3
2
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303