4E7K: PFV integrase Target Capture Complex (TCC-Mn), freeze-trapped prior to strand transfer, at 3.0 A resolution

PDB ID: 4E7KDownload
MMDB ID: 99930
PDB Deposition Date: 2012/3/17
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 3.02  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 4E7K: decameric; determined by author and by software (PISA)
Molecular Components in 4E7K
Label Count Molecule
Proteins (4 molecules)
4
Pro-pol Polyprotein
Molecule annotation
Nucleotides(6 molecules)
2
DNA (5'-d(*ap*tp*tp*gp*tp*cp*ap*tp*gp*gp*ap*ap*tp*tp*tp*cp*gp*cp*a)-3')
Molecule annotation
2
DNA (5'-d(*tp*gp*cp*gp*ap*ap*ap*tp*tp*cp*cp*ap*tp*gp*ap*cp*a)-3')
Molecule annotation
2
DNA (5'-d(*cp*cp*cp*gp*ap*gp*gp*cp*ap*cp*gp*tp*gp*cp*tp*ap*gp*cp*ap*cp*gp*tp*gp*cp*cp*tp*cp*gp*gp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
2
ZINC IONZINC ION
2
6
MANGANESE (II) IONMANGANESE (II) ION
3
2
SULFATE IONSULFATE ION
4
1
TRIETHYLENE GLYCOLTRIETHYLENE GLYCOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303