4E0U: Crystal structure of CdpNPT in complex with thiolodiphosphate and (S)-benzodiazependione

PDB ID: 4E0UDownload
MMDB ID: 100134
PDB Deposition Date: 2012/3/5
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 2.6  Å
Source Organism:
Similar Structures:
Biological Unit for 4E0U: dimeric; determined by author and by software (PISA)
Molecular Components in 4E0U
Label Count Molecule
Proteins (2 molecules)
2
Cyclic Dipeptide N-prenyltransferase
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
2
(3S)-3-(1H-indol-3-ylmethyl)-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione(3S)-3-(1H-indol-3-ylmethyl)-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione
2
2
TRIHYDROGEN THIODIPHOSPHATETRIHYDROGEN THIODIPHOSPHATE
3
2
IMIDAZOLEIMIDAZOLE
4
4
1,2-ETHANEDIOL1,2-ETHANEDIOL
5
2
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303