4DZ6: Transition state mimic of nucleoside-diphosphate kinase from borrelia burgdorferi with bound vanadate and adp

PDB ID: 4DZ6Download
MMDB ID: 98064
PDB Deposition Date: 2012/2/29
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 4DZ6: hexameric; determined by author and by software (PISA)
Molecular Components in 4DZ6
Label Count Molecule
Proteins (6 molecules)
6
Nucleoside Diphosphate Kinase
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
3
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
2
3
oxido(dioxo)vanadiumoxido(dioxo)vanadium
3
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
4
3
VANADATE IONVANADATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303