4DK9: Crystal Structure of MBD4 Catalytic Domain Bound to Abasic DNA

PDB ID: 4DK9Download
MMDB ID: 99074
PDB Deposition Date: 2012/2/3
Updated in MMDB: 2012/08
Experimental Method:
x-ray diffraction
Resolution: 2.76  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 4DK9: trimeric; determined by author and by software (PISA)
Molecular Components in 4DK9
Label Count Molecule
Protein (1 molecule)
1
Methyl-cpg-binding Domain Protein 4
Molecule annotation
Nucleotides(2 molecules)
1
5'-d(*ap*ap*gp*ap*cp*gp*tp*gp*gp*ap*c)-3'
Molecule annotation
1
5'-d(*tp*gp*tp*cp*cp*ap*(3dr)p*gp*tp*cp*t)-3'
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
POTASSIUM IONPOTASSIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303