4D7A: Crystal structure of E. coli tRNA N6-threonylcarbamoyladenosine dehydratase, TcdA, in complex with AMP at 1.801 Angstroem resolution

PDB ID: 4D7ADownload
MMDB ID: 128993
PDB Deposition Date: 2014/11/21
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.801  Å
Source Organism:
Similar Structures:
Biological Unit for 4D7A: dimeric; determined by author and by software (PISA)
Molecular Components in 4D7A
Label Count Molecule
Proteins (2 molecules)
2
tRNA Threonylcarbamoyladenosine Dehydratase
(Gene symbol: tcdA)
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
2
POTASSIUM IONPOTASSIUM ION
2
2
ADENOSINE MONOPHOSPHATEADENOSINE MONOPHOSPHATE
3
3
GLYCEROLGLYCEROL
4
1
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303