4D72: Crystal structure of a family 98 glycoside hydrolase catalytic module (Sp3GH98) in complex with the type 2 blood group A-tetrasaccharide (E558A L19 mutant)

PDB ID: 4D72Download
MMDB ID: 126258
PDB Deposition Date: 2014/11/19
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.11  Å
Source Organism:
Similar Structures:
Biological Unit for 4D72: monomeric; determined by author and by software (PISA)
Molecular Components in 4D72
Label Count Molecule
Protein (1 molecule)
1
Glycoside Hydrolase
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-galactopyranosebeta-D-galactopyranose
3
1
alpha-L-fucopyranosealpha-L-fucopyranose
4
1
2-acetamido-2-deoxy-alpha-D-galactopyranose2-acetamido-2-deoxy-alpha-D-galactopyranose
5
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303