4D6Q: crystal structure of human JMJD2D in complex with 2,4-PDCA

PDB ID: 4D6QDownload
MMDB ID: 150239
PDB Deposition Date: 2014/11/14
Updated in MMDB: 2024/05
Experimental Method:
x-ray diffraction
Resolution: 1.292  Å
Source Organism:
Similar Structures:
Biological Unit for 4D6Q: dimeric; determined by author and by software (PISA)
Molecular Components in 4D6Q
Label Count Molecule
Proteins (2 molecules)
2
Lysine-specific Demethylase 4D
(Gene symbol: KDM4D)
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
2
ZINC IONZINC ION
2
2
NICKEL (II) IONNICKEL (II) ION
3
2
PYRIDINE-2,4-DICARBOXYLIC ACIDPYRIDINE-2,4-DICARBOXYLIC ACID
4
10
1,2-ETHANEDIOL1,2-ETHANEDIOL
5
2
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303