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4D61: Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state

PDB ID:

MMDB ID:

127407

PDB Deposition Date:

2014/11/7

Updated in MMDB:

2022/11

Experimental Method:

electron microscopy

Resolution:

9 Å

Source Organism:

Cricket paralysis virus▼

Taxonomy	Molecule
Cricket paralysis virus	j
Oryctolagus cuniculus	1, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g
Homo sapiens	h, i

Similar Structures:

Molecular Components in 4D61
Label	Count	Molecule
Proteins (35 molecules)
A	1	40S Ribosomal Protein SA
B	1	40S Ribosomal Protein S3A
C	1	40S Ribosomal Protein S2
D	1	40S Ribosomal Protein S3
E	1	40S Ribosomal Protein S4, Y Isoform 1
F	1	40S Ribosomal Protein S5
G	1	40S Ribosomal Protein S6
H	1	40S Ribosomal Protein S7
I	1	40S Ribosomal Protein S8
J	1	40S Ribosomal Protein S9
K	1	40S Ribosomal Protein S10
L	1	40S Ribosomal Protein S11
M	1	40S Ribosomal Protein S12
N	1	40S Ribosomal Protein S13
O	1	40S Ribosomal Protein S14
P	1	40S Ribosomal Protein S15
Q	1	40S Ribosomal Protein S16
R	1	40S Ribosomal Protein S17
S	1	40S Ribosomal Protein S18
T	1	40S Ribosomal Protein S19
U	1	40S Ribosomal Protein S20
V	1	40S Ribosomal Protein S21
W	1	40S Ribosomal Protein S15a
X	1	40S Ribosomal Protein S23
Y	1	40S Ribosomal Protein S24
Z	1	40S Ribosomal Protein S25
a	1	40S Ribosomal Protein S26
b	1	40S Ribosomal Protein S27
c	1	40S Ribosomal Protein S28
d	1	40S Ribosomal Protein S29
e	1	40S Ribosomal Protein S30
f	1	Ubiquitin-40s Ribosomal Protein S27a
g	1	Guanine Nucleotide-binding Protein Subunit Beta-2-like 1
h	1	Eukaryotic Peptide Chain Release Factor Subunit 1
i	1	Eukaryotic Peptide Chain Release Factor Gtp-binding Subunit Erf3a
Nucleotides(2 molecules)
1	1	18S rRNA
j	1	Cricket Paralysis Virus Ires RNA

* Click molecule labels to explore molecular sequence information.

Citing MMDB