4D61: Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state

PDB ID: 4D61Download
MMDB ID: 127407
PDB Deposition Date: 2014/11/7
Updated in MMDB: 2022/11
Experimental Method:
electron microscopy
Resolution: 9  Å
Source Organism:
Cricket paralysis virus
Similar Structures:
Biological Unit for 4D61: 37-meric; determined by author
Molecular Components in 4D61
Label Count Molecule
Proteins (35 molecules)
1
40S Ribosomal Protein SA
Molecule annotation
1
40S Ribosomal Protein S3A
Molecule annotation
1
40S Ribosomal Protein S2
Molecule annotation
1
40S Ribosomal Protein S3
Molecule annotation
1
40S Ribosomal Protein S4, Y Isoform 1
Molecule annotation
1
40S Ribosomal Protein S5
Molecule annotation
1
40S Ribosomal Protein S6
Molecule annotation
1
40S Ribosomal Protein S7
Molecule annotation
1
40S Ribosomal Protein S8
Molecule annotation
1
40S Ribosomal Protein S9
Molecule annotation
1
40S Ribosomal Protein S10
Molecule annotation
1
40S Ribosomal Protein S11
Molecule annotation
1
40S Ribosomal Protein S12
Molecule annotation
1
40S Ribosomal Protein S13
Molecule annotation
1
40S Ribosomal Protein S14
Molecule annotation
1
40S Ribosomal Protein S15
Molecule annotation
1
40S Ribosomal Protein S16
Molecule annotation
1
40S Ribosomal Protein S17
Molecule annotation
1
40S Ribosomal Protein S18
Molecule annotation
1
40S Ribosomal Protein S19
Molecule annotation
1
40S Ribosomal Protein S20
Molecule annotation
1
40S Ribosomal Protein S21
Molecule annotation
1
40S Ribosomal Protein S15a
Molecule annotation
1
40S Ribosomal Protein S23
Molecule annotation
1
40S Ribosomal Protein S24
Molecule annotation
1
40S Ribosomal Protein S25
Molecule annotation
1
40S Ribosomal Protein S26
Molecule annotation
1
40S Ribosomal Protein S27
Molecule annotation
1
40S Ribosomal Protein S28
Molecule annotation
1
40S Ribosomal Protein S29
Molecule annotation
1
40S Ribosomal Protein S30
Molecule annotation
1
Ubiquitin-40s Ribosomal Protein S27a
Molecule annotation
1
Guanine Nucleotide-binding Protein Subunit Beta-2-like 1
Molecule annotation
1
Eukaryotic Peptide Chain Release Factor Subunit 1
Molecule annotation
1
Eukaryotic Peptide Chain Release Factor Gtp-binding Subunit Erf3a
Molecule annotation
Nucleotides(2 molecules)
1
18S rRNA
Molecule annotation
1
Cricket Paralysis Virus Ires RNA
Molecule annotation
* Click molecule labels to explore molecular sequence information.

Citing MMDB