4D5L: Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state

PDB ID: 4D5LDownload
MMDB ID: 126608
PDB Deposition Date: 2014/11/5
Updated in MMDB: 2022/11
Experimental Method:
electron microscopy
Resolution: 9  Å
Source Organism:
Similar Structures:
Molecular Components in 4D5L
Label Count Molecule
Proteins (33 molecules)
1
40S Ribosomal Protein Es26
Molecule annotation
1
40S Ribosomal Protein Es27
(Gene symbol: RPS3A)
Molecule annotation
1
40S Ribosomal Protein Es28
Molecule annotation
1
40S Ribosomal Protein Us14
Molecule annotation
1
40S Ribosomal Protein Es30
Molecule annotation
1
40S Ribosomal Protein Es31
(Gene symbol: RPS5)
Molecule annotation
1
40S Ribosomal Protein Rack1
(Gene symbol: RPS6)
Molecule annotation
1
40S Ribosomal Protein ES7
(Gene symbol: RPS7)
Molecule annotation
1
40S Ribosomal Protein ES8
Molecule annotation
1
40S Ribosomal Protein US4
(Gene symbol: RPS9)
Molecule annotation
1
40S Ribosomal Protein Es10
Molecule annotation
1
40S Ribosomal Protein Us17
Molecule annotation
1
40S Ribosomal Protein Es12
(Gene symbol: RPS12)
Molecule annotation
1
40S Ribosomal Protein Us15
(Gene symbol: RPS13)
Molecule annotation
1
40S Ribosomal Protein Us11
Molecule annotation
1
40S Ribosomal Protein Us19
Molecule annotation
1
40S Ribosomal Protein US9
(Gene symbol: RPS16)
Molecule annotation
1
40S Ribosomal Protein Es17
Molecule annotation
1
40S Ribosomal Protein Us13
(Gene symbol: RPS18)
Molecule annotation
1
40S Ribosomal Protein Es19
Molecule annotation
1
40S Ribosomal Protein Us10
(Gene symbol: RPS20)
Molecule annotation
1
40S Ribosomal Protein Es21
Molecule annotation
1
40S Ribosomal Protein US8
(Gene symbol: RPS15A)
Molecule annotation
1
40S Ribosomal Protein Us12
(Gene symbol: LOC100346439)
Molecule annotation
1
40S Ribosomal Protein Es24
Molecule annotation
1
40S Ribosomal Protein Es25
(Gene symbol: RPS25)
Molecule annotation
1
40S Ribosomal Protein US2
Molecule annotation
1
40S Ribosomal Protein ES1
(Gene symbol: LOC100345694)
Molecule annotation
1
40S Ribosomal Protein US5
(Gene symbol: RPS28)
Molecule annotation
1
40S Ribosomal Protein US3
(Gene symbol: RPS29)
Molecule annotation
1
40S Ribosomal Protein ES4
Molecule annotation
1
40S Ribosomal Protein US7
(Gene symbol: LOC100348379)
Molecule annotation
1
40S Ribosomal Protein ES6
(Gene symbol: RACK1)
Molecule annotation
Nucleotide(1 molecule)
1
18S rRNA 2
Molecule annotation
* Click molecule labels to explore molecular sequence information.

Citing MMDB