3ZK4: Structure of purple acid phosphatase PPD1 isolated from yellow lupin (Lupinus luteus) seeds

PDB ID: 3ZK4Download
MMDB ID: 253475
PDB Deposition Date: 2013/1/21
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 1.65  Å
Source Organism:
Similar Structures:
Biological Unit for 3ZK4: hexameric; determined by author and by software (PISA)
Molecular Components in 3ZK4
Label Count Molecule
Proteins (6 molecules)
6
Diphosphonucleotide Phosphatase 1
Molecule annotation
Chemicals and Non-standard biopolymers (64 molecules)
1
38
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
6
FE (III) IONFE (III) ION
3
6
MANGANESE (II) IONMANGANESE (II) ION
4
8
GLYCEROLGLYCEROL
5
6
PHOSPHATE IONPHOSPHATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303