3WA0: Crystal Structure Of Merlin Complexed With Dcaf1/vprbp

Citation:
Abstract
Merlin, a tumor suppressor encoded by the neurofibromatosis type 2 gene, has been shown to suppress tumorigenesis by inhibiting the Cullin 4-RING E3 ubiquitin ligase CRL4DCAF 1 in the nucleus. This inhibition is mediated by direct binding of merlin to DDB1-and-Cullin 4-associated Factor 1 (DCAF1), yet the binding mode of merlin to DCAF1 is not well defined. Here, we report structural and biophysical studies of the merlin binding to DCAF1 and its interference with CD44 binding. The crystal structure of the merlin FERM domain bound to the DCAF1 C-terminal acidic tail reveals that the hydrophobic IILXLN motif located at the C-terminal end of DCAF1 binds subdomain C of the FERM domain by forming a beta-strand. The binding site and mode resemble that of merlin binding to the CD44 cytoplasmic tail. Competition binding assay showed that CD44 and DCAF1 compete for binding to the merlin FERM domain in solution. The CD44 cytoplasmic tail is known to be cleaved for nuclear translocation by regulated intra-membrane proteolysis (RIP). Our structure implies that, in the nucleus, the CD44 cytoplasmic tail cleaved by RIP could release DCAF1 from merlin by competing for binding to the merlin FERM domain, which results in the inhibition of merlin-mediated suppression of tumorigenesis.
PDB ID: 3WA0Download
MMDB ID: 120183
PDB Deposition Date: 2013/4/20
Updated in MMDB: 2014/06
Experimental Method:
x-ray diffraction
Resolution: 2.31  Å
Source Organism:
Mus musculus
Similar Structures:
Biological Unit for 3WA0: dimeric; determined by author
Molecular Components in 3WA0
Label Count Molecule
Proteins (2 molecules)
1
Merlin(Gene symbol: Nf2)
Molecule annotation
1
Protein Vprbp(Gene symbol: DCAF1)
Molecule annotation
* Click molecule labels to explore molecular sequence information.

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