3VK7: Crystal structure of DNA-glycosylase bound to DNA containing 5-Hydroxyuracil

PDB ID: 3VK7Download
MMDB ID: 95807
PDB Deposition Date: 2011/11/10
Updated in MMDB: 2011/12
Experimental Method:
x-ray diffraction
Resolution: 2.1  Å
Source Organism:
Acanthamoeba polyphaga mimivirus▼
Similar Structures:
Biological Unit for 3VK7: trimeric; determined by author and by software (PISA)
Molecular Components in 3VK7
Label Count Molecule
Protein (1 molecule)
1
Probable Formamidopyrimidine-dna Glycosylase
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*gp*tp*ap*gp*ap*cp*gp*tp*gp*gp*ap*cp*g)-3')
Molecule annotation
1
DNA (5'-d(*cp*gp*tp*cp*cp*ap*(ohu)p*gp*tp*cp*tp*ap*c)-3')
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
FORMIC ACIDFORMIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303