3VI0: Crystal structure of the O intermediate of the L93A mutant of bacteriorhodopsin

PDB ID: 3VI0Download
MMDB ID: 100466
PDB Deposition Date: 2011/9/13
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.3  Å
Source Organism:
Similar Structures:
Biological Unit for 3VI0: trimeric; determined by author and by software (PISA)
Molecular Components in 3VI0
Label Count Molecule
Proteins (3 molecules)
3
Bacteriorhodopsin
(Gene symbol: VNG_RS05715)
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
3
alpha-D-glucopyranosealpha-D-glucopyranose
2
3
alpha-D-mannopyranosealpha-D-mannopyranose
3
3
3-O-sulfo-beta-D-galactopyranose3-O-sulfo-beta-D-galactopyranose
4
3
RETINALRETINAL
5
3
octyl 1-thio-beta-D-glucopyranosideoctyl 1-thio-beta-D-glucopyranoside
6
3
2,3-DI-PHYTANYL-GLYCEROL2,3-DI-PHYTANYL-GLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303