3VDF: Crystal Structure of C-lobe of Bovine lactoferrin Complexed with diaminopimelic acid at 1.46 A Resolution

PDB ID: 3VDFDownload
MMDB ID: 96586
PDB Deposition Date: 2012/1/5
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 1.46  Å
Source Organism:
Similar Structures:
Biological Unit for 3VDF: dimeric; determined by author and by software (PISA)
Molecular Components in 3VDF
Label Count Molecule
Proteins (2 molecules)
1
Lactotransferrin
(Gene symbol: LTF)
Molecule annotation
1
C-terminal Peptide of Lactotransferrin
(Gene symbol: LTF)
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
5
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
FE (III) IONFE (III) ION
3
2
ZINC IONZINC ION
4
1
CARBONATE IONCARBONATE ION
5
1
SULFATE IONSULFATE ION
6
1
2,6-DIAMINOPIMELIC ACID2,6-DIAMINOPIMELIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303