3V8N: Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with 8-bromo-5'-amino-5'-deoxyadenosine, reacted with a citrate molecule in N site

PDB ID: 3V8NDownload
MMDB ID: 98005
PDB Deposition Date: 2011/12/23
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 2.3801  Å
Source Organism:
Similar Structures:
Biological Unit for 3V8N: tetrameric; determined by author
Molecular Components in 3V8N
Label Count Molecule
Proteins (4 molecules)
4
Probable Inorganic Polyphosphate/atp-nad Kinase 1
(Gene symbol: ppnK)
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
4
5'-amino-8-bromo-5'-deoxyadenosine5'-amino-8-bromo-5'-deoxyadenosine
2
4
8-bromo-5'-{[3-carboxy-2-(carboxymethyl)-2-hydroxypropanoyl]amino}-5'-deoxyadenosine8-bromo-5'-{[3-carboxy-2-(carboxymethyl)-2-hydroxypropanoyl]amino}-5'-deoxyadenosine
3
4
CITRIC ACIDCITRIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303