3TY9: Crystal Structure of C. Thermocellum PNKP Ligase Domain AMP-Adenylate

PDB ID: 3TY9Download
MMDB ID: 96725
PDB Deposition Date: 2011/9/24
Updated in MMDB: 2024/11
Experimental Method:
x-ray diffraction
Resolution: 3.12  Å
Source Organism:
Similar Structures:
Biological Unit for 3TY9: dimeric; determined by software (PISA)
Molecular Components in 3TY9
Label Count Molecule
Proteins (2 molecules)
2
Polynucleotide 2',3'-cyclic Phosphate Phosphodiesterase / Polynucleotide 5'-hydroxyl-kinase / Polynucleotide 3'-phosphatase
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
2
ADENOSINE MONOPHOSPHATEADENOSINE MONOPHOSPHATE
2
7
(4S)-2-METHYL-2,4-PENTANEDIOL(4S)-2-METHYL-2,4-PENTANEDIOL
3
2
(4R)-2-METHYLPENTANE-2,4-DIOL(4R)-2-METHYLPENTANE-2,4-DIOL
4
1
GLYCEROLGLYCEROL
5
2
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303