3T8X: Crystal structure of human CD1b in complex with synthetic antigenic diacylsulfoglycolipid SGL12 and endogenous spacer

PDB ID: 3T8XDownload
MMDB ID: 94651
PDB Deposition Date: 2011/8/2
Updated in MMDB: 2011/10
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
Similar Structures:
Biological Unit for 3T8X: dimeric; determined by author and by software (PISA)
Molecular Components in 3T8X
Label Count Molecule
Proteins (2 molecules)
1
T-cell Surface Glycoprotein Cd1b
(Gene symbol: CD1B)
Molecule annotation
1
Beta-2-microglobulin
(Gene symbol: B2M)
Molecule annotation
Chemicals and Non-standard biopolymers (17 molecules)
1
6
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
4
alpha-L-fucopyranosealpha-L-fucopyranose
3
1
beta-D-mannopyranosebeta-D-mannopyranose
4
1
SULFATE IONSULFATE ION
5
1
ACETATE IONACETATE ION
6
1
2-O-sulfo-alpha-D-glucopyranosyl 2-O-hexadecanoyl-3-O-[(2E,4S,6S,8S)-2,4,6,8-tetramethyltetracos-2-enoyl]-alpha-D-glucopyranoside2-O-sulfo-alpha-D-glucopyranosyl 2-O-hexadecanoyl-3-O-[(2E,4S,6S,8S)-2,4,6,8-tetramethyltetracos-2-enoyl]-alpha-D-glucopyranoside
7
1
tetracontanetetracontane
8
2
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303