3T5J: Ternary complex of HNE Adduct modified DNA (5'-TXG-3' vs 13-mer) with Dpo4 and incoming dDTP

PDB ID: 3T5JDownload
MMDB ID: 97266
PDB Deposition Date: 2011/7/27
Updated in MMDB: 2024/03
Experimental Method:
x-ray diffraction
Resolution: 2.4  Å
Source Organism:
Saccharolobus solfataricus P2▼
Similar Structures:
Biological Unit for 3T5J: trimeric; determined by author and by software (PISA)
Molecular Components in 3T5J
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase IV
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*cp*ap*tp*(hn1)p*gp*ap*ap*tp*cp*cp*tp*tp*cp*cp*cp*cp*c)-3')
Molecule annotation
1
DNA (5'-d(*gp*gp*gp*gp*gp*ap*ap*gp*gp*ap*tp*tp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
1
2'-DEOXYADENOSINE 5'-TRIPHOSPHATE2'-DEOXYADENOSINE 5'-TRIPHOSPHATE
2
3
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303