3S5A: ABH2 cross-linked to undamaged dsDNA-2 with cofactors

PDB ID: 3S5ADownload
MMDB ID: 100247
PDB Deposition Date: 2011/5/21
Updated in MMDB: 2013/07
Experimental Method:
x-ray diffraction
Resolution: 1.7  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3S5A: trimeric; determined by author and by software (PISA)
Molecular Components in 3S5A
Label Count Molecule
Protein (1 molecule)
1
Alpha-ketoglutarate-dependent Dioxygenase Alkb Homolog 2
Molecule annotation
Nucleotides(2 molecules)
1
5'-d(*cp*tp*gp*tp*cp*tp*cp*ap*cp*tp*gp*tp*cp*g)-3'
Molecule annotation
1
5'-d(*tp*cp*gp*ap*cp*ap*gp*tp*gp*ap*gp*ap*cp*a)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
MANGANESE (II) IONMANGANESE (II) ION
2
1
2-OXOGLUTARIC ACID2-OXOGLUTARIC ACID
3
3
GLYCEROLGLYCEROL
4
1
propane-1-thiolpropane-1-thiol
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303