3RUM: New strategy to analyze structures of glycopeptide antibiotic-target complexes

PDB ID: 3RUMDownload
MMDB ID: 100235
PDB Deposition Date: 2011/5/5
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.851  Å
Source Organism:
Similar Structures:
Biological Unit for 3RUM: trimeric; determined by author
Molecular Components in 3RUM
Label Count Molecule
Protein (1 molecule)
1
Maltose-binding Periplasmic Protein
Molecule annotation
Chemicals and Non-standard biopolymers (22 molecules)
BC
2
Ristocetin
1
2
beta-D-glucopyranosebeta-D-glucopyranose
2
4
alpha-D-mannopyranosealpha-D-mannopyranose
3
2
alpha-D-arabinofuranosealpha-D-arabinofuranose
4
2
alpha-L-rhamnopyranosealpha-L-rhamnopyranose
5
2
alpha-D-glucopyranosealpha-D-glucopyranose
6
3
ISOPROPYL ALCOHOLISOPROPYL ALCOHOL
7
3
SULFATE IONSULFATE ION
8
2
3-amino-2,3,6-trideoxy-alpha-L-ribo-hexopyranose3-amino-2,3,6-trideoxy-alpha-L-ribo-hexopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303