3RTV: Crystal structure of the large fragment of DNA polymerase I from Thermus Aquaticus in a closed ternary complex with natural primer/template DNA

PDB ID: 3RTVDownload
MMDB ID: 100032
PDB Deposition Date: 2011/5/4
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3RTV: trimeric; determined by author and by software (PISA)
Molecular Components in 3RTV
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase I, Thermostable
Molecule annotation
Nucleotides(2 molecules)
1
(5'-d(*gp*ap*cp*cp*ap*cp*gp*gp*cp*gp*cp*(ddg))-3')
Molecule annotation
1
(5'-d(*ap*ap*ap*gp*cp*gp*cp*gp*cp*cp*gp*tp*gp*gp*tp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
1
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
2
3
MAGNESIUM IONMAGNESIUM ION
3
6
GLYCEROLGLYCEROL
4
3
ACETATE IONACETATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303