3R8F: Replication initiator DnaA bound to AMPPCP and single-stranded DNA

PDB ID: 3R8FDownload
MMDB ID: 93883
PDB Deposition Date: 2011/3/23
Updated in MMDB: 2018/11
Experimental Method:
x-ray diffraction
Resolution: 3.366  Å
Source Organism:
Aquifex aeolicus▼
Similar Structures:
Biological Unit for 3R8F: pentameric; determined by author
Molecular Components in 3R8F
Label Count Molecule
Proteins (4 molecules)
4
Chromosomal Replication Initiator Protein Dnaa
Molecule annotation
Nucleotide(1 molecule)
1
5'-d(p*ap*ap*ap*ap*ap*ap*ap*ap*ap*ap*ap*a)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
4
MAGNESIUM IONMAGNESIUM ION
2
4
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTERPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303