3QDC: Crystal structure of Natronomonas pharaonis sensory rhodopsin II in the active state

PDB ID: 3QDCDownload
MMDB ID: 243174
PDB Deposition Date: 2011/1/18
Updated in MMDB: 2024/02
Experimental Method:
x-ray diffraction
Resolution: 2.5  Å
Source Organism:
Similar Structures:
Biological Unit for 3QDC: monomeric; determined by author and by software (PISA)
Molecular Components in 3QDC
Label Count Molecule
Protein (1 molecule)
1
Sensory Rhodopsin-2
(Gene symbol: NP_RS11910)
Molecule annotation
Chemicals and Non-standard biopolymers (33 molecules)
1
1
RETINALRETINAL
2
1
octyl beta-D-glucopyranosideoctyl beta-D-glucopyranoside
3
29
EICOSANEEICOSANE
4
2
2,3-DI-PHYTANYL-GLYCEROL2,3-DI-PHYTANYL-GLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303