3PW4: Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-N7-Gua) with DNA Polymerase IV and incoming dATP

PDB ID: 3PW4Download
MMDB ID: 92526
PDB Deposition Date: 2010/12/7
Updated in MMDB: 2011/09
Experimental Method:
x-ray diffraction
Resolution: 2.9  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3PW4: trimeric; determined by author and by software (PISA)
Molecular Components in 3PW4
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase IV
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*tp*tp*gp*ap*ap*tp*cp*cp*tp*tp*cp*cp*cp*cp*c)-3')
Molecule annotation
1
DNA (5'-d(*gp*gp*gp*gp*gp*ap*ap*gp*gp*ap*tp*tp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
1
2'-DEOXYADENOSINE 5'-TRIPHOSPHATE2'-DEOXYADENOSINE 5'-TRIPHOSPHATE
2
3
CALCIUM IONCALCIUM ION
3
1
8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B18,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303