3PKY: Polymerase Domain from Mycobacterium tuberculosis Ligase D in complex with DNA, UTP and Manganese

PDB ID: 3PKYDownload
MMDB ID: 88695
PDB Deposition Date: 2010/11/12
Updated in MMDB: 2011/05
Experimental Method:
x-ray diffraction
Resolution: 3.1  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3PKY: tetrameric; determined by author
Molecular Components in 3PKY
Label Count Molecule
Proteins (2 molecules)
2
Putative DNA Ligase-like Protein
Molecule annotation
Nucleotides(2 molecules)
1
DNA 5'-d(p*gp*cp*gp*gp*c)-3'
Molecule annotation
1
DNA 5'-d(*g*cp*cp*gp*cp*ap*ap*cp*gp*cp*ap*cp*g)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
URIDINE 5'-TRIPHOSPHATEURIDINE 5'-TRIPHOSPHATE
2
4
MANGANESE (II) IONMANGANESE (II) ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303