3PFE: Crystal structure of a M20A metallo peptidase (dapE, lpg0809) from Legionella pneumophila subsp. pneumophila str. philadelphia 1 at 1.50 A resolution

PDB ID: 3PFEDownload
MMDB ID: 86357
PDB Deposition Date: 2010/10/28
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.5  Å
Source Organism:
Similar Structures:
Biological Unit for 3PFE: dimeric; determined by author and by software (PISA)
Molecular Components in 3PFE
Label Count Molecule
Proteins (2 molecules)
2
Succinyl-diaminopimelate Desuccinylase
(Gene symbol: dapE)
Molecule annotation
Chemicals and Non-standard biopolymers (48 molecules)
1
8
ZINC IONZINC ION
2
16
CHLORIDE IONCHLORIDE ION
3
2
IMIDAZOLEIMIDAZOLE
4
2
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
5
20
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303