3OIN: Crystal structure of Saccharomyces cerevisiae Nep1/Emg1 bound to S-adenosylhomocysteine and 1 molecule of cognate RNA

PDB ID: 3OINDownload
MMDB ID: 186871
PDB Deposition Date: 2010/8/19
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
Similar Structures:
Biological Unit for 3OIN: trimeric; determined by author and by software (PISA)
Molecular Components in 3OIN
Label Count Molecule
Proteins (2 molecules)
2
Ribosomal RNA Small Subunit Methyltransferase Nep1
(Gene symbol: EMG1)
Molecule annotation
Nucleotide(1 molecule)
1
5'-r(*gp*gp*gp*cp*up*up*cp*ap*ap*cp*gp*cp*cp*c)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
2
GLYCEROLGLYCEROL
2
1
S-ADENOSYL-L-HOMOCYSTEINES-ADENOSYL-L-HOMOCYSTEINE
3
1
MAGNESIUM IONMAGNESIUM ION
4
1
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303