3O8X: Recognition of Glycolipid Antigen by iNKT Cell TCR

PDB ID: 3O8XDownload
MMDB ID: 85246
PDB Deposition Date: 2010/8/3
Updated in MMDB: 2018/11
Experimental Method:
x-ray diffraction
Resolution: 2.74  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3O8X: tetrameric; determined by author and by software (PISA)
Molecular Components in 3O8X
Label Count Molecule
Proteins (4 molecules)
1
Antigen-presenting Glycoprotein Cd1d1
Molecule annotation
1
Beta-2-microglobulin
Molecule annotation
1
Valpha14 Chimera (Mouse Variable Domain, Human T-cell Receptor Alpha Chain C Region Constant Domain)
Molecule annotation
1
Vbeta8.2 Chimera (Mouse Variable Domain, Human T-cell Receptor Beta-2 Chain C Region Constant Domain)
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
5
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
alpha-L-fucopyranosealpha-L-fucopyranose
3
1
(2S,3R)-3-HYDROXY-2-(TETRADECANOYLAMINO)OCTADECYL ALPHA-D-GALACTOPYRANOSIDURONIC ACID(2S,3R)-3-HYDROXY-2-(TETRADECANOYLAMINO)OCTADECYL ALPHA-D-GALACTOPYRANOSIDURONIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303