3O5A: Crystal Structure of partially reduced Periplasmic Nitrate Reductase from Cupriavidus necator using Ionic Liquids

PDB ID: 3O5ADownload
MMDB ID: 89674
PDB Deposition Date: 2010/7/28
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.72  Å
Source Organism:
Similar Structures:
Biological Unit for 3O5A: dimeric; determined by author and by software (PISA)
Molecular Components in 3O5A
Label Count Molecule
Proteins (2 molecules)
1
Periplasmic Nitrate Reductase
(Gene symbol: napA)
Molecule annotation
1
Diheme Cytochrome C Napb
(Gene symbol: E6A55_RS33325)
Molecule annotation
Chemicals and Non-standard biopolymers (26 molecules)
1
1
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
2
1
DIOXOTHIOMOLYBDENUM(VI) IONDIOXOTHIOMOLYBDENUM(VI) ION
3
2
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
4
19
FORMIC ACIDFORMIC ACID
5
1
CHLORIDE IONCHLORIDE ION
6
2
HEME CHEME C
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303