3NXD: JC polyomavirus VP1 in complex with LSTc

PDB ID: 3NXDDownload
MMDB ID: 86262
PDB Deposition Date: 2010/7/13
Updated in MMDB: 2010/11
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 3NXD: pentameric; determined by author and by software (PISA)
Molecular Components in 3NXD
Label Count Molecule
Proteins (5 molecules)
5
Major Capsid Protein VP1
(Gene symbol: Jvgp4)
Molecule annotation
Chemicals and Non-standard biopolymers (21 molecules)
1
2
beta-D-glucopyranosebeta-D-glucopyranose
2
4
beta-D-galactopyranosebeta-D-galactopyranose
3
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
4
2
N-acetyl-alpha-neuraminic acidN-acetyl-alpha-neuraminic acid
5
5
GLYCEROLGLYCEROL
6
6
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303