3NVD: Structure of YBBD in complex with pugnac

PDB ID: 3NVDDownload
MMDB ID: 83878
PDB Deposition Date: 2010/7/8
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 1.836  Å
Source Organism:
Similar Structures:
Biological Unit for 3NVD: monomeric; determined by author and by software (PISA)
Molecular Components in 3NVD
Label Count Molecule
Protein (1 molecule)
1
Uncharacterized Lipoprotein Ybbd
(Gene symbol: nagZ)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
1
O-(2-ACETAMIDO-2-DEOXY D-GLUCOPYRANOSYLIDENE) AMINO-N-PHENYLCARBAMATEO-(2-ACETAMIDO-2-DEOXY D-GLUCOPYRANOSYLIDENE) AMINO-N-PHENYLCARBAMATE
2
1
TETRAETHYLENE GLYCOLTETRAETHYLENE GLYCOL
3
1
SODIUM IONSODIUM ION
4
2
ACETATE IONACETATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303