3MVY: X-ray structure of the diatomic oxo-intermediate NikA/1-Int', prior hydroxylation

PDB ID: 3MVYDownload
MMDB ID: 88494
PDB Deposition Date: 2010/5/5
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.5  Å
Source Organism:
Similar Structures:
Biological Unit for 3MVY: monomeric; determined by author and by software (PISA)
Molecular Components in 3MVY
Label Count Molecule
Protein (1 molecule)
1
Nickel-binding Periplasmic Protein
(Gene symbol: nikA)
Molecule annotation
Chemicals and Non-standard biopolymers (15 molecules)
1
4
ACETATE IONACETATE ION
2
1
SULFATE IONSULFATE ION
3
6
GLYCEROLGLYCEROL
4
1
2-[2-[carboxymethyl(phenylmethyl)amino]ethyl-[(2-hydroxyphenyl)methyl]amino]ethanoic acid2-[2-[carboxymethyl(phenylmethyl)amino]ethyl-[(2-hydroxyphenyl)methyl]amino]ethanoic acid
5
1
PEROXIDE IONPEROXIDE ION
6
2
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303